Vai offline con l'app Player FM !
#46 HiFi reads and HiCanu with Sergey Nurk and Sergey Koren
Manage episode 263004228 series 1537951
In this episode, I continue to talk (but mostly listen) to Sergey Koren and Sergey Nurk. If you missed the previous episode, you should probably start there. Otherwise, join us to learn about HiFi reads, the tradeoff between read length and quality, and what tricks HiCanu employs to resolve highly similar repeats.
Links:
- HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads (Sergey Nurk, Brian P. Walenz, Arang Rhie, Mitchell R. Vollger, Glennis A. Logsdon, Robert Grothe, Karen H. Miga, Evan E. Eichler, Adam M. Phillippy, Sergey Koren)
- Canu on GitHub (includes the HiCanu mode)
- The Telomere-to-Telomere (T2T) consortium
If you enjoyed this episode, please consider supporting the podcast on Patreon.
70 episodi
Manage episode 263004228 series 1537951
In this episode, I continue to talk (but mostly listen) to Sergey Koren and Sergey Nurk. If you missed the previous episode, you should probably start there. Otherwise, join us to learn about HiFi reads, the tradeoff between read length and quality, and what tricks HiCanu employs to resolve highly similar repeats.
Links:
- HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads (Sergey Nurk, Brian P. Walenz, Arang Rhie, Mitchell R. Vollger, Glennis A. Logsdon, Robert Grothe, Karen H. Miga, Evan E. Eichler, Adam M. Phillippy, Sergey Koren)
- Canu on GitHub (includes the HiCanu mode)
- The Telomere-to-Telomere (T2T) consortium
If you enjoyed this episode, please consider supporting the podcast on Patreon.
70 episodi
Tutti gli episodi
×Benvenuto su Player FM!
Player FM ricerca sul web podcast di alta qualità che tu possa goderti adesso. È la migliore app di podcast e funziona su Android, iPhone e web. Registrati per sincronizzare le iscrizioni su tutti i tuoi dispositivi.